Class List

Here are the classes, structs, unions and interfaces with brief descriptions:

[detail level 123]

▼NJson
CAllOfRequirement	Requires that all of a list of Requirements hold
CAnyOfRequirement	Requires that at least one of a list of Requirements hold
CArrayRequirement	Array of Requirements
CBooleanRequirement	Requires json value to be of type Bool
CDependencyRequirement	Requires dependencies to be met
CEnumRequirement	Requires entry to be member of an enum
CIntegerRequirement	Requirements on Integer values
CNotRequirement	Requires a given Requirement to fail
CNullRequirement	Requires value to be of type Null
CNumberRequirement	Requirements on a numeric value
CObjectRequirement	Requirements on an object
COneOfRequirement	Requires exactly one of a list of Requirements to hold
CRequirement	Requirements on input files
CRequirementLoader	Helper class to load Requirement
CStringRequirement	Requirements on strings
▼NSSAGES
CABF	Adaptive Biasing Force Algorithm
CAlphaRMSDCV	Collective variable to measure alpha helix secondary structure
CAngleCV	Collective variable to calculate angle
CAntiBetaRMSDCV	Collective variable to measure antiparallel beta secondary structure
CBasis	Basis Function Sampling Algorithm
CBasisLUT	Look-up table for basis functions
CBoxVolumeCV	Collective variable on the volume of a box
CBuildException	Exception to be thrown when building the Driver fails
CCollectiveVariable	Abstract class for a collective variable
CConstraint	Interface for Constraint implementations
CCOPSS	Wrapper class for COPSS simulations
CCOPSSImage	Image method
CCVManager	Collective variable manager
CDirectForwardFlux	ForwardFlux sampling method
CElasticBand	Multi-walker Elastic Band
CEventListener	Base abstract class for listening in to events fired by "Hook"
CFiniteTempString	Finite Temperature Spring Method
▼CForwardFlux	ForwardFlux sampling method
CFFSConfigID	Nested class to store different FFS Config IDs
CGaussianPK	Gaussian Function
▼CGrid	Basic Grid
CGridIterator	Custom Iterator
CGridBase	Base class for Grids
CGyrationTensorCV	Collective variable on components of the gyration tensor
CHill	Multidimensional hill
▼CHistogram	Basic Histogram
CHistIterator	Custom Iterator
CHook	Base class for hooks into the simultion engines
CIncludePlugin	Class for JSON loader include plugin
CJSONLoader	Class for loading JSON content from files
CJSONLoaderPlugin	Abstract class for JSON loader plugins
CLogger	Base class for logging SSAGES data
CMap	Map for histogram and coefficients
CMeta	"Vanilla" multi-dimensional Metadynamics
CMethod	Interface for Method implementations
CMockCV	Mock collective variable for testing purposes
CPairwiseCV	Generalized collective variable based on pairwise properties of atoms
CPairwiseKernel	Pairwise kernel base class
CParallelBetaRMSDCV	Collective variable to measure parallel beta sheet secondary structure
CParticleCoordinateCV	Collective variable on a particle coordinate
CParticlePositionCV	Collective variable on an particle position
CParticleSeparationCV	Collective variable on the distance between two particles' centers of mass
CRationalSwitchPK	Rational Switching Function
CReadBackbone	Utility class to read protein backbone atoms from a reference file
CReadFile	Utility class to read file
CResourceHandler	Class that handles SSAGES resources for a simulation
CRMSDCV	Collective variable to calculate root mean square displacement
CRouseModeCV	Collective variable is a Rouse mode for a polymer chain comprised of N particle groups
CSnapshot	Class containing a snapshot of the current simulation in time
CStringMethod	String base class for FTS, Swarm, and elastic band
CSwarm	Swarm of Trajectories String Method
CTorsionalCV	Collective variable on the torsion angles
CUmbrella	Umbrella sampling method
CSerializable