SSAGES  0.1
A MetaDynamics Package
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SSAGES::RMSDCV Member List

This is the complete list of members for SSAGES::RMSDCV, including all inherited members.

atomids_SSAGES::RMSDCVprivate
bounds_SSAGES::CollectiveVariableprotected
boxgrad_SSAGES::CollectiveVariableprotected
BuildCV(const Json::Value &json, const std::string &path)SSAGES::CollectiveVariablestatic
CollectiveVariable()SSAGES::CollectiveVariableinline
COMref_SSAGES::RMSDCVprivate
Evaluate(const Snapshot &snapshot) override (defined in SSAGES::RMSDCV)SSAGES::RMSDCVinline
GetBoundaries()SSAGES::CollectiveVariableinline
GetBoxGradient() const SSAGES::CollectiveVariableinline
GetDifference(double location) const SSAGES::CollectiveVariableinlinevirtual
GetGradient() const SSAGES::CollectiveVariableinline
GetMinimumImage(double) const SSAGES::CollectiveVariableinlinevirtual
GetPeriodicValue(double location) const SSAGES::CollectiveVariableinlinevirtual
GetValue() const SSAGES::CollectiveVariableinline
grad_SSAGES::CollectiveVariableprotected
Initialize(const Snapshot &snapshot) override (defined in SSAGES::RMSDCV)SSAGES::RMSDCVinline
molecule_SSAGES::RMSDCVprivate
pertatoms_SSAGES::RMSDCVprivate
refcoord_SSAGES::RMSDCVprivate
RMSDCV(std::vector< int > atomids, std::string molxyz, bool use_range=false)SSAGES::RMSDCVinline
val_SSAGES::CollectiveVariableprotected
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