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SSAGES
0.1
A MetaDynamics Package
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This is the complete list of members for SSAGES::Basis, including all inherited members.
| Basis(const MPI_Comm &world, const MPI_Comm &comm, Histogram< int > *hist, const std::vector< unsigned int > &polyord, const std::vector< double > &restraint, const std::vector< double > &boundUp, const std::vector< double > &boundLow, unsigned int cyclefreq, unsigned int frequency, const std::string bnme, const std::string cnme, const double temperature, const double tol, const double weight, bool converge) | SSAGES::Basis | inline |
| BasisInit(const CVList &cvs) | SSAGES::Basis | private |
| basisout_ | SSAGES::Basis | private |
| bnme_ | SSAGES::Basis | private |
| boundLow_ | SSAGES::Basis | private |
| bounds_ | SSAGES::Basis | private |
| boundUp_ | SSAGES::Basis | private |
| Build(const Json::Value &json, const MPI_Comm &world, const MPI_Comm &comm, const std::string &path) | SSAGES::Basis | static |
| BuildMethod(const Json::Value &json, const MPI_Comm &world, const MPI_Comm &comm, const std::string &path) | SSAGES::Method | static |
| CalcBiasForce(const CVList &cvs) | SSAGES::Basis | private |
| cnme_ | SSAGES::Basis | private |
| coeff_ | SSAGES::Basis | private |
| coeff_arr_ | SSAGES::Basis | private |
| coeffout_ | SSAGES::Basis | private |
| comm_ | SSAGES::Method | protected |
| converge_exit_ | SSAGES::Basis | private |
| cvmask_ | SSAGES::Method | protected |
| cyclefreq_ | SSAGES::Basis | private |
| derivatives_ | SSAGES::Basis | private |
| EventListener(uint frequency) | SSAGES::EventListener | inline |
| GetFrequency() const | SSAGES::EventListener | inline |
| hist_ | SSAGES::Basis | private |
| iteration_ | SSAGES::Basis | private |
| LUT_ | SSAGES::Basis | private |
| Method(uint frequency, const MPI_Comm &world, const MPI_Comm &comm) | SSAGES::Method | inline |
| mpiid_ | SSAGES::Basis | private |
| polyords_ | SSAGES::Basis | private |
| PostIntegration(Snapshot *snapshot, const class CVManager &cvmanager) override | SSAGES::Basis | virtual |
| PostSimulation(Snapshot *snapshot, const class CVManager &cvmanager) override | SSAGES::Basis | virtual |
| PreSimulation(Snapshot *snapshot, const class CVManager &cvmanager) override | SSAGES::Basis | virtual |
| PrintBias(const CVList &cvs, const double beta) | SSAGES::Basis | private |
| restraint_ | SSAGES::Basis | private |
| SetBasis(const std::vector< double > &coeff, std::vector< double > &unbias) | SSAGES::Basis | inline |
| SetCVMask(const std::vector< uint > &mask) | SSAGES::Method | inline |
| SetIteration(const int iter) | SSAGES::Basis | inline |
| temperature_ | SSAGES::Basis | private |
| tol_ | SSAGES::Basis | private |
| unbias_ | SSAGES::Basis | private |
| UpdateBias(const CVList &cvs, const double) | SSAGES::Basis | private |
| weight_ | SSAGES::Basis | private |
| world_ | SSAGES::Method | protected |
| ~Basis() | SSAGES::Basis | inline |
| ~EventListener() | SSAGES::EventListener | inlinevirtual |
| ~Method() | SSAGES::Method | inlinevirtual |
1.8.7