SSAGES
0.1
A MetaDynamics Package
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This is the complete list of members for SSAGES::Basis, including all inherited members.
Basis(const MPI_Comm &world, const MPI_Comm &comm, Histogram< int > *hist, const std::vector< unsigned int > &polyord, const std::vector< double > &restraint, const std::vector< double > &boundUp, const std::vector< double > &boundLow, unsigned int cyclefreq, unsigned int frequency, const std::string bnme, const std::string cnme, const double temperature, const double tol, const double weight, bool converge) | SSAGES::Basis | inline |
BasisInit(const CVList &cvs) | SSAGES::Basis | private |
basisout_ | SSAGES::Basis | private |
bnme_ | SSAGES::Basis | private |
boundLow_ | SSAGES::Basis | private |
bounds_ | SSAGES::Basis | private |
boundUp_ | SSAGES::Basis | private |
Build(const Json::Value &json, const MPI_Comm &world, const MPI_Comm &comm, const std::string &path) | SSAGES::Basis | static |
BuildMethod(const Json::Value &json, const MPI_Comm &world, const MPI_Comm &comm, const std::string &path) | SSAGES::Method | static |
CalcBiasForce(const CVList &cvs) | SSAGES::Basis | private |
cnme_ | SSAGES::Basis | private |
coeff_ | SSAGES::Basis | private |
coeff_arr_ | SSAGES::Basis | private |
coeffout_ | SSAGES::Basis | private |
comm_ | SSAGES::Method | protected |
converge_exit_ | SSAGES::Basis | private |
cvmask_ | SSAGES::Method | protected |
cyclefreq_ | SSAGES::Basis | private |
derivatives_ | SSAGES::Basis | private |
EventListener(uint frequency) | SSAGES::EventListener | inline |
GetFrequency() const | SSAGES::EventListener | inline |
hist_ | SSAGES::Basis | private |
iteration_ | SSAGES::Basis | private |
LUT_ | SSAGES::Basis | private |
Method(uint frequency, const MPI_Comm &world, const MPI_Comm &comm) | SSAGES::Method | inline |
mpiid_ | SSAGES::Basis | private |
polyords_ | SSAGES::Basis | private |
PostIntegration(Snapshot *snapshot, const class CVManager &cvmanager) override | SSAGES::Basis | virtual |
PostSimulation(Snapshot *snapshot, const class CVManager &cvmanager) override | SSAGES::Basis | virtual |
PreSimulation(Snapshot *snapshot, const class CVManager &cvmanager) override | SSAGES::Basis | virtual |
PrintBias(const CVList &cvs, const double beta) | SSAGES::Basis | private |
restraint_ | SSAGES::Basis | private |
SetBasis(const std::vector< double > &coeff, std::vector< double > &unbias) | SSAGES::Basis | inline |
SetCVMask(const std::vector< uint > &mask) | SSAGES::Method | inline |
SetIteration(const int iter) | SSAGES::Basis | inline |
temperature_ | SSAGES::Basis | private |
tol_ | SSAGES::Basis | private |
unbias_ | SSAGES::Basis | private |
UpdateBias(const CVList &cvs, const double) | SSAGES::Basis | private |
weight_ | SSAGES::Basis | private |
world_ | SSAGES::Method | protected |
~Basis() | SSAGES::Basis | inline |
~EventListener() | SSAGES::EventListener | inlinevirtual |
~Method() | SSAGES::Method | inlinevirtual |